Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------MADKNRT-----------FKLVGAGSSSTQEKIEKPALSFMQDAWRRLKKN--KLAVVSLYLLALLLTFSLASNLFVTQKDANGFDSKKVTTYRNLPPKLSSNLPFWNGS---IKYAGNTESTDAYKSQNVPEKVKYALGTDSLGRSVAKRIIVGIRISLLVAIAATFIDLIIGVTYGLVSGFA-----GGRLDTLMQRIVEVISSIPNLVIVTMLGL------VLGNGITAIIISIAFTGWTSMSRQVRNLTLSYREREFVLAARSLGESPIKIAFKHILPNISGIIIVQIMMTIPSAIMYEAVLSAINLGVKPPTASLGSLISDAQENLQYYPYQVILPALALVMISLAFILLGDGLRDAFDPKSSDE-------------------------------- |
| 1L2L Chain:A ((7-457)) | WESLYEKALDKVEASIRKVRGVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRKWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQLSELQASLFLDGPIYVPT------RLIHPREF--EDCIHYIYEFPRNFKVLDFEAPRENRFIGAADDY----------NPILYVREEWIERFEEIAKRSELAIISGLHPLTQE--NHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIVKLLKHFYSVGLN--EVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFHTYG---YYLALTREKGEHVRDALLFSALAAATKAMKGNIEKLSDIREGLAVPIGEQGLEVEKILEKEFSLR-DGIGSIEDYQLTFIPTKGIGDTISSSAFVSEFSLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146531 for 2257 contacts (-64.9/contact) +
2D Compatibility (PS) -32505 + (NN) -135 + (LL) 1220
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -182451.0 ( -80.84 by residue)
QMean score : 0.269
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