Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3TGN Chain:B ((1-146))
MRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEIK-
General information:
TITO was launched using:
RESULT:
Template:
3TGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49110 for 900 contacts (-54.6/contact) +
2D Compatibility (PS) -14912 + (NN) -5036 + (LL) -172
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -89080.0 ( -98.98 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3TGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TGN-query.scw
PDB file :
Tito_Scwrl_3TGN.pdb
: