Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLISEEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRINGLIDCSPFGCRTGFHMIMWGKQDATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
4XCH Chain:D ((46-191))
-----------LDHTIVKAPYIRLISEEVGPKGDIITNFDIRLIQPNENAMDTAGLHTIEHLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDSEKIAQVIKSSLEEIAEGITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILSQGISTDAFERKPI
General information:
TITO was launched using:
RESULT:
Template:
4XCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88727 for 1092 contacts (-81.3/contact) +
2D Compatibility (PS) -15904 + (NN) -10667 + (LL) 1316
1D Compatibility (HY) -19600 + (ID) 6600
Total energy: -140182.0 ( -128.37 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_4XCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XCH-query.scw
PDB file :
Tito_Scwrl_4XCH.pdb
: