Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFASPSRYIQGKDALFQSIEHIKSLGQTPLILCDDVVYNIVGERFLSYLQDDLLPHRVS-FNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKVNLPVVIAPTVASTDAPTSALSVIYTDEGAFEKYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENRPKEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDR----YVSNHQ
4MCA Chain:B ((2-366))LRIIQSPGKYIQGANALAAVGQYAKSLADHYLVIADDFVMKLAGDTLMGSLQQHGVKHHAALFNG--CHKEIDRLGRELKAHGCRGVIGVGGGKTLDTAKAIAHYQQLPVVLIPTIASTDAPTSALSVIYTEQGEFAEYLIYPRNPDMVVMDVAIIAKAPVRLLVAGMGDALSTYFEAQACFDAQATSMAGGKSTLAALSLARLCYDTLLAEGVKAKLAVEAGVVTEAVERIIEANTYLSGIGFESSGLAAAHAIHNGFTVLE-ECHHLYHGEKVAFGTLAQLVLQNSPMAQIETVLAFCHRIGLPITLAEMGVSGDAVEKIMAVAQASCAAGETIHNMPFKVTPAGVQAAILTADRLGSAWLQQH-


General information:
TITO was launched using:
RESULT:

Template: 4MCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -216403 for 3357 contacts (-64.5/contact) +
2D Compatibility (PS) -39110 + (NN) -20579 + (LL) 196
1D Compatibility (HY) -36400 + (ID) 8650
Total energy: -320946.0 ( -95.61 by residue)
QMean score : 0.576

(partial model without unconserved sides chains):
PDB file : Tito_4MCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MCA-query.scw
PDB file : Tito_Scwrl_4MCA.pdb: