Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKVYREKTAKVEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN |
| 3LYV Chain:A ((2-59)) | -----------------------------------------------------------------------------------------------------------------------------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRREDGNLGLIEAKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7745 for 276 contacts (28.1/contact) +
2D Compatibility (PS) -5622 + (NN) 3057 + (LL) 11288
1D Compatibility (HY) 400 + (ID) 600
Total energy: 16268.0 ( 58.94 by residue)
QMean score : 0.016
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