Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKEGQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE
2COV Chain:D ((408-433))
---------------------------------------------GWNYVCLNDYCLPGNKSNGAFRKTFN---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2COV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2957 for 110 contacts (-26.9/contact) +
2D Compatibility (PS) -2680 + (NN) -984 + (LL) 5152
1D Compatibility (HY) -800 + (ID) 250
Total energy: -2519.0 ( -22.90 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_2COV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COV-query.scw
PDB file :
Tito_Scwrl_2COV.pdb
: