Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQAVLKELAKAELHCHLDGSLSLPAIRKLANMADIILPSSDK-ELRKYVIAPAQTESLVDYLKTFEFI-RPLLQTKEALRFAAYDVARQAALENVIYIEIRFAPELSMD------------KGLTASDTVLAVLEGLADAQKEFNIVARALVCGMRQSSHKTTKDIIKHIVDLAPKGLVGFDFAGDEFSYP---TDSLVDLIQEVKRSGYPMTLHAGECGCAKHIADSLN-LGIKRMGHVTALTGQRDLIKRFVEEDAVAEMCLTSNLQTKAASSIQSFPYQELYDAGGKITINTDNRTVSDTNLTKEYSLFVTYFGTKIEDFLVFNQNAVKASFTSDSEKDTLLHKLQENYDSYLK |
| 3IAR Chain:A ((3-353)) | -----AFDKPKVELHVHLDGSIKPETILYYGRRRGIALPANTAEGLLNVIG-MDKPLTLPDFLAKFDYYMPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRHQPN-WSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLLYKAYGMPPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166886 for 2998 contacts (-55.7/contact) +
2D Compatibility (PS) -35377 + (NN) -7946 + (LL) 924
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -228735.0 ( -76.30 by residue)
QMean score : 0.504
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