Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFK-----YFWTSLSLQAPLKALEFVLEQAKMPTELSGE-----LSETQYLVAQFSDELAPHDDFWIALSQVIYDSFPGNSLAEDTVLNRKLHQFRYLISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGE------------IFAFPDDEPVINSKLLISFHTEFII-------DDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDPKFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYF-NKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN------ |
| 3E2V Chain:A ((11-393)) | PLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKN--ALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVH-PCCVNEFAEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYP-----LFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLSSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLLLE---TDAPWCEIKRTHASFQYLAKYQEVRDFE---------YPAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45722 for 2497 contacts (-18.3/contact) +
2D Compatibility (PS) -32933 + (NN) -4131 + (LL) 896
1D Compatibility (HY) 3600 + (ID) 1600
Total energy: -79890.0 ( -31.99 by residue)
QMean score : 0.228
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