Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTL---STVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
3M9Y Chain:B ((3-254))--RTPIIAGNWKMNKTVQEAKDFVNALPT-LPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK


General information:
TITO was launched using:
RESULT:

Template: 3M9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114689 for 2117 contacts (-54.2/contact) +
2D Compatibility (PS) -27610 + (NN) -15456 + (LL) 244
1D Compatibility (HY) -21600 + (ID) 7450
Total energy: -186561.0 ( -88.13 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_3M9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M9Y-query.scw
PDB file : Tito_Scwrl_3M9Y.pdb: