Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITKFPDQWQDKLTQRQFDDLTDIQNKLFQAITDGDNILGISPTGTGKTLAYLFPTLLKLQP-KKSQQLLILAPNSELAGQIFDVTKEWAEPLGLTAQLFLSGSSQKRQIERLKKGPE-ILIGTAGRVFELV-KLKKIKMMNINTIVLDEFDELLGDSQYHFVDNI-INRV-PRDQQMIYISATNKLDNSKLAD------NTITIDLSDQKLDTIKHYYITVDKRER--TDLLRKFSNIPDFRGLVFFNSLSDLGACEERLQFNRASAVSLASDINIKFRKVILEKFKNHDISLLLGTDLVARGIDIDNLEYVINFDIARDK------ETYTHRSGRTGRMGKEGCVITFVTHKEELKQLKKYATVAELVLHNQKLHLK |
| 3EWS Chain:B ((103-424)) | ------------------------------------NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGK---FYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCS--KFIDPKKIKVFVLDEADVMIA-TQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR----GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146196 for 2233 contacts (-65.5/contact) +
2D Compatibility (PS) -31996 + (NN) -17209 + (LL) 2556
1D Compatibility (HY) -24000 + (ID) 4950
Total energy: -221795.0 ( -99.33 by residue)
QMean score : 0.472
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