Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPIKISKFKKNVSDSHFIHFFTVFSGIFLVMTVIILQVMRYGVYSSVDSSLKYISTHPKNYINMVMSRTAAYLDNSNIASVKLKPGGQTVANTDIILFTSEEEVINYFDAFSNYQFLKPNKKNLGGISELTLTNIFGQDETYHAVTVKVNNPAYPNVTYMTAIVNIDQLVNAKERYEKIIIFVMTTFWIISIGASIYLAKWAQKPIIENYERQKAFVENASHELRTPLAVLQNRLETL----FRKPNATILENSENIASSLDEVRNMRILTTNLLNLARRDDG--IKPELAVIKPTLFDSIFENYDLIAQENG---------KNFTGHNMIQDSFKTDKTLLKQLMTILFDNAIKYTDNDGSIDFTISETDKYLFLEIADNGPGISEEDKVRIFDRFYRVDKARTRQQGGFGLGLSLAQQIVNSLRGNITVIDNKPRGSIFKIKLPKVKG |
| 4U7O Chain:B ((37-261)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVA----PGFLKVTQEETDRMIRMINELLSLS-----TRVDMELVNIN-EMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVE-IDTDK--FTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDKAR---QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64951 for 1490 contacts (-43.6/contact) +
2D Compatibility (PS) -21321 + (NN) -9530 + (LL) 17476
1D Compatibility (HY) -19200 + (ID) 3700
Total energy: -101226.0 ( -67.94 by residue)
QMean score : 0.478
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