Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQPILQVSDLSVYYNKKKALKEVSMDFYPNEITALIGPSGSGKSTLLRAINRMGDLNPEVTLTGAVMYNGHNVYSPRTDTVELRKEIGMVFQQPNPFP-MSVFENVVYG-LRLKGIKDKATLDEAVETSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARTLATKPKIILLDEPTSALDPISAGKIEETLHGL-KDQYTMLLVTRSMQQASRISDRTGFFLDGNLIEYGNTKEMFMNPKHKETEDYITGKFG |
| 4U02 Chain:D ((2-238)) | --EPIIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQ-----EGEVVVDGLSVKDDRA-LREIRREVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALEL-LERVGILDQARK----YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115852 for 1959 contacts (-59.1/contact) +
2D Compatibility (PS) -25193 + (NN) -8981 + (LL) 784
1D Compatibility (HY) -20800 + (ID) 4850
Total energy: -174892.0 ( -89.28 by residue)
QMean score : 0.459
|
|
|