Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLE--NEADTLAAFYENRVIAILEKRGNEFKPHKVLL |
| 1ZE1 Chain:D ((1-272)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEE---RECNVTEEEIREAIFSFVGEYDQVPPA------------------------PKRVKIFKIWDVNIEGRD-----VSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLN---VFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWD---GFKKGEVVRVFNEEGRLLALAEAER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76634 for 1887 contacts (-40.6/contact) +
2D Compatibility (PS) -25834 + (NN) -6280 + (LL) 2600
1D Compatibility (HY) -16000 + (ID) 4450
Total energy: -126598.0 ( -67.09 by residue)
QMean score : 0.381
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