Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTETKGDA------------IDVMQSSESISGTTNSITDSHTSIKHGVTLLSQNISQAKK------AKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
1GBS Chain:A ((40-155)) | -------------------------RDLKAMDRYKTIIKKVGEKLCVEP--AVIAGIISRESHAGKVLKNGWGDRGNGFGLMQVDKRSHKPQ-GTWNGEVHITQGTTILTDFIKRIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARMDIGTTHDDYANDVVARAQYYKQHGY-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19857 for 685 contacts (-29.0/contact) +
2D Compatibility (PS) -10502 + (NN) -4734 + (LL) 5392
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -34151.0 ( -49.86 by residue)
QMean score : 0.316
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