Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNIKKMLFGSYDYH-KISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK-------------------------------------------------------------- |
| 4JP0 Chain:A ((2-381)) | LDTNKVYEISNHANGLYAATYLSLDDSGVSLMNKNDDDIDDYNLKWFLFPIDDDQYIITSYAANNCKVWNVNNDKINVSTYSSTNSIQKWQIKANGSSYVIQSDNGKVLTAGTGQALGLIRLTDESSNNPNQQWNLTSVQTIQLPQKPIIDTKLKDYPKYSGNIDNGTSPQLMGWTLVPCIMVNDPNIDKNTQIKTTPYYILKKYQYWQRAVGSNVALRPHEKKSYTYEWGTEIDQKTTIINTLGFQINIDSGMKFDIPEVGGGTDEIKTQLNEELKIEYSHETKIMEKYQEQSEIDNPTDQ--SMNSIGFLTITSLELYRYNGSEIRIMQIQTSDNDTYNVTSYPNHQQALLLLTNHSYEEVEEITNIPKSTLIKLKKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5035 for 136 contacts (-37.0/contact) +
2D Compatibility (PS) -4933 + (NN) -845 + (LL) 396
1D Compatibility (HY) -400 + (ID) 450
Total energy: -11267.0 ( -82.85 by residue)
QMean score : 0.368
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