Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVRIYHNPNCGTSRNVLAIIRHCGIEPEIIYYLKTPPSRMELVELLLEMKLSARELLRTDVPAYEKFNLESSSVTDEEMIDAMIQDPILINRPIVVTSKGAKLCRPCEEILTILPVKMEKDFVKEDGQIIQSL
1S3C Chain:A ((3-132))
--NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDE
General information:
TITO was launched using:
RESULT:
Template:
1S3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113040 for 981 contacts (-115.2/contact) +
2D Compatibility (PS) -13645 + (NN) -4215 + (LL) 312
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -146438.0 ( -149.27 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_1S3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3C-query.scw
PDB file :
Tito_Scwrl_1S3C.pdb
: