Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MID----YIDLALTYGGFTS--LDKVYLEKK--------LDGLSKQQRLDFITPPPSVINAYFAEIYQKQG--PEAATDYYFDLS----KALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFD-ETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN--- |
| 2CVH Chain:A ((1-220)) | MLSTGTKSLDSLLG-GGFAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEGGFSPERLVQMAETRGLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVD--SITAHYRAEENRSGLIAELSRQL--QVLLWIARKH-------NIPVIVINQVHFDSRTEMTKPVAEQTLGYRC----KDILRLDKLPKPGLRVAVLER---HRFRPEGLMAYFRITERGIEDVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39405 for 1434 contacts (-27.5/contact) +
2D Compatibility (PS) -20733 + (NN) -10689 + (LL) 836
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -81991.0 ( -57.18 by residue)
QMean score : 0.265
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