Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
| 4EQQ Chain:B ((16-107)) | --------------------------------------------------------------------------------------------------------------------RTAVSKAKQYASTVHMSKEELRSQLVS--------FDKYSQDASDYAVENSGIDYNKQALEKAKQYQDTLSMSPDAIRDQLVSF--DKFTQEEADYAVANLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -738 for 712 contacts (-1.0/contact) +
2D Compatibility (PS) -9970 + (NN) -3379 + (LL) 8748
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -13739.0 ( -19.30 by residue)
QMean score : 0.623
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