Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLNLLMKPKTSSKQKKEKTKKREVLPTTLNTLAYQGLFPNGLMQVSPDYFSQSYLLGDVNYQTVGLEEKEAIVEKYSNLINSLDDKTNFQLTIFNKKVNLEQFRKSVLYPLQEDGFDSYREELNRMMDSNLEAGENNFSAVKLISFGKSDQAPKLAYRSLSQIGEYFKSGLSEIEASFTLLTGEERVNNLADMLRGENHLPFTYKDLVLSGQTTKHFIAPTSISFKHKNHIEIDNRLLQIVYVRDYGMELGDKFIRELMQSDLEVVISLHAKGSTKSEAMKKLRTKKTLMESQKIGEQQKMARSGIYLDKVGHALESNIDEAEDLLKTMTQTGDKLFDTVFLIGFFADNEEQLKQSLDIIKQVAGSNDLIIDNLTYMQEAALNSLLPFGKNCLEGVSRSLLTSNIAVNSPWTSVDLQDAGGKFYGINQISSNIITIDRG----KLNTPSGLILGTSGSGKGMATKHEIISTKLKEADKDTEIIIVDPENEYSVSGQAFGGEIIDIAPDSRTFLNVLDLSDDNLDEDPVKVKSEFLLSWIGKLLDR---KMDGREKSIIDRVTRLTYKHFEEPSLVEWVFVLSQQPE-------------------QEARDLALDMELYVEGSL-D-IFSHKTTIQTD-------SHFLIYNVKKLGDELKQIALMVIFDQIWNRVVKNQ-KLGKKTWIYFDEMQLLLLDQFASDFFFKLWSRVRKYGATPTGITQNVETLLLD---ANGRRIIANSEFMILLKQ---AKSDREELVHMLGLSKEL--------------EKYLVNPEKGAGLIKAGSTVVPFRNKIPHQTKLFDIMSTDPDKMRT |
| 1E9R Chain:A ((37-413)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELA-YTGLLR---GDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDY------DWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGT-PSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLA----SLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66334 for 2471 contacts (-26.8/contact) +
2D Compatibility (PS) -33112 + (NN) -17055 + (LL) 29444
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -93757.0 ( -37.94 by residue)
QMean score : 0.336
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