Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKPIVRDTFFLQQKSQMASRADV-SLAKDLQDTLHANQNYCVGMAANMIGSLKRVIIINVGITN---LVMFNPVLVAKSDPYETEESCLSLVGCRS-TQRYRHITISYRDINWKEQQIKLTDFPAQICQHELDHLEGILI
3QU1 Chain:B ((20-145))
-------------QSKQVTDVASVQTLIDDLLDTLYATDN-GIGLAAPQVGREEAIVVIDLSDNRDQPLVLINPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDREGKPLRIETSDFLAIVMQHEIDHLSGNLF
General information:
TITO was launched using:
RESULT:
Template:
3QU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64171 for 883 contacts (-72.7/contact) +
2D Compatibility (PS) -12547 + (NN) 2016 + (LL) 1460
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -83792.0 ( -94.89 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_3QU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QU1-query.scw
PDB file :
Tito_Scwrl_3QU1.pdb
: