Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILTLFPEMF-APLEHSIVGKAKERGLLEINYHNFRE-NAEKSRHVDDEPYGGGQGMLLRAQPIFDTI---DKIDAQKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDER-IKSLVTDEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSSGLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL
4MCC Chain:B ((1-243))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL------------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-----------
General information:
TITO was launched using:
RESULT:
Template:
4MCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133838 for 1580 contacts (-84.7/contact) +
2D Compatibility (PS) -24089 + (NN) -7542 + (LL) 800
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -193319.0 ( -122.35 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4MCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MCC-query.scw
PDB file :
Tito_Scwrl_4MCC.pdb
: