Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSA---ADVWNAEKLEELFNTLNPNRKLRLEREKLAKEKG
2H9Z Chain:A ((48-79))
--------TSKNAKFYSFNVSMEVSNESERNEIFQKISQLDKVVQTL--------
General information:
TITO was launched using:
RESULT:
Template:
2H9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1340 for 102 contacts (13.1/contact) +
2D Compatibility (PS) -3418 + (NN) -3269 + (LL) 1116
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -6181.0 ( -60.60 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2H9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H9Z-query.scw
PDB file :
Tito_Scwrl_2H9Z.pdb
: