Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVE-NDQLLGLVTEGTMAEAQPSKATSLSIYEMNYLLNKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDNGQLYGIITDRDVFKAFLEIAGYGQEGYRLVILADEGIGVLSKVLNRLSSANLSVKRLVIIERKAGKKAVEIQLEGYADKDVLKQELVFDDVIVETLEKTVKKPLS
2O16 Chain:B ((7-133))
--VEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESS----------SLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSD----FVTIAINLLELQEESEP-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98266 for 863 contacts (-113.9/contact) +
2D Compatibility (PS) -13146 + (NN) -5364 + (LL) 7452
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -122674.0 ( -142.15 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2O16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O16-query.scw
PDB file :
Tito_Scwrl_2O16.pdb
: