Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSAIDKLVKASHL-IDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE
3CMD Chain:B ((3-196))------LVPGRHMMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPS-------------SLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE


General information:
TITO was launched using:
RESULT:

Template: 3CMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -89680 for 1417 contacts (-63.3/contact) +
2D Compatibility (PS) -19595 + (NN) -3701 + (LL) 872
1D Compatibility (HY) -25200 + (ID) 6650
Total energy: -143954.0 ( -101.59 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_3CMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CMD-query.scw
PDB file : Tito_Scwrl_3CMD.pdb: