Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLTLVYISLSGNTQSFVKRLSEQLSTWHNCQVSTINIKEQNHQTFPVDQPFVALLPTYLEGGN-GIDNGDQEILTIPLGDFIAAHNNVKNCIGIVGSGNRNFNNQYCLTAKQYSERFGFPMLGDFELRGTSSDVERIANIIVETLSNFKA
3N3A Chain:C ((23-151))
---QLVYFSSSSENTQRFIERLG--LP--AV------RIPLNERERIQVDEPYILIVPSYGGGGTAGAV-------PRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQP-
General information:
TITO was launched using:
RESULT:
Template:
3N3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75335 for 990 contacts (-76.1/contact) +
2D Compatibility (PS) -13348 + (NN) 557 + (LL) 1568
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -97358.0 ( -98.34 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3N3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3A-query.scw
PDB file :
Tito_Scwrl_3N3A.pdb
: