Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQLAKDFIINRGNYFSNDIYEDTLIISSYSNLPSDVTINDLERTIPWKLSKEIYQLLNI--------------NQISKTVKLKQLS---------------------DGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
4PL0 Chain:B ((360-540)) | --------------ILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYF-GDIYLNDI---SLRNI-SDEDLND----AIYYLTQDDYIFMDTLRFNLRLANYDASENEIFKVLKLANLSVVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEI---LSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIVASGHFRDLMVSNEYIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45586 for 972 contacts (-46.9/contact) +
2D Compatibility (PS) -15511 + (NN) -3999 + (LL) 1912
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -77834.0 ( -80.08 by residue)
QMean score : 0.396
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