Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNYSGEVGLQYHLQIRPGDVGRYVIMPGDPKRCAKIAEHFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEELKLCGADTFIRVGTCGGIDLDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNALGMDNPMAHDTEAAIQVAVEALRTLIENDKSQ
3QPB Chain:R ((31-280))
-------VGLQYHLQIRPGDVGRYVIMPGDPKRCAKIAEHFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEELKLCGADTFIRVGTCGGIELDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNALGMDNPM----EAAIQVAVEALRTLIENDK--
General information:
TITO was launched using:
RESULT:
Template:
3QPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118496 for 2231 contacts (-53.1/contact) +
2D Compatibility (PS) -27414 + (NN) -21920 + (LL) 500
1D Compatibility (HY) -33200 + (ID) 12250
Total energy: -212780.0 ( -95.37 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3QPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QPB-query.scw
PDB file :
Tito_Scwrl_3QPB.pdb
: