Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSEKEILDALSKVYSEEVIQADDYFRQAIFELASQLEKEGMNSLLATKIDSLINQYVLTHQFDAPKSIFDLSRLVKTKASHYKGTAISAIMLGSFLSGGPK
3F2E Chain:A ((8-90))
FTAVAEQVSAVLSQYGITG-PNRAIYQGFGLKVARALNRLGGGPALVNMINGLKAYYISAF-----------------NANPTVLDAVTDIITGS-PTGYVS
General information:
TITO was launched using:
RESULT:
Template:
3F2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25215 for 575 contacts (-43.9/contact) +
2D Compatibility (PS) -8934 + (NN) -2913 + (LL) 1544
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -38718.0 ( -67.34 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3F2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F2E-query.scw
PDB file :
Tito_Scwrl_3F2E.pdb
: