Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQEGQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR |
1JDC Chain:? ((358-418)) | RADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPGQVASGSF-SEAVNASNGQVRVWRS-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21515 for 376 contacts (57.2/contact) +
2D Compatibility (PS) -5985 + (NN) 1105 + (LL) 4080
1D Compatibility (HY) 0 + (ID) 600
Total energy: 20115.0 ( 53.50 by residue)
QMean score : 0.112
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