Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFQSKINYPKKSSIITQITLWYSSFIFILVIGVLIGSFFISKSIAENKSKKNLEAKAVQMSQALAKGHRYEAFEDGIFYSVYDQNGKVIYSGFPKGFKRDLDHQHKHKKKLSLFSMENRTFQYVDIPISGKNQWLRAIRTVDRLDKQLTELLFSLGIVLPLMLIIITVGGYLILKRTFRPIQEITETAQFITQNEDYTKRIITKNNENELTELAAVINTMLASIESSFVREKQFNNDVSHELRTPVTVILSESEYGKNYAENLSEAKESF-EVIHRQSLSMKKLVEQLLELTKAENPLS-IQLEPLNFSIMMKQLVSDSSRLL---DNTPIHLDSQIE---DDLWIIGQQTLLKRLFDNLFSNAIKFTNNHISISLR--QSDNQIVFSIKDNGLGISVDDQSKIWNRFYQVDSARTKDSQSGIGLGLSLVKQIATIHRAKIWVDSKPDNGSQFTLTFPKLKKD |
| 4U7O Chain:B ((37-261)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLS------TRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDKAR----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69926 for 1507 contacts (-46.4/contact) +
2D Compatibility (PS) -21805 + (NN) -8700 + (LL) 19592
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -101139.0 ( -67.11 by residue)
QMean score : 0.410
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