Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQKVKKRADYLMSFGLLTLPH-QLMKLVLMEQIYRAFMIRQGTPYHK
1OY5 Chain:A ((83-155))
---------------------------------------------------------------------KPFVLITEPWGEKLNQ-KLVNELSK-----KERIMIICGRYEGVDERVKKIVDMEISLGDFILSGGEIVALAVIDAVSRVLPGVLSEPYPV
General information:
TITO was launched using:
RESULT:
Template:
1OY5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52669 for 460 contacts (-114.5/contact) +
2D Compatibility (PS) -7663 + (NN) -3882 + (LL) 6000
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -64564.0 ( -140.36 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1OY5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OY5-query.scw
PDB file :
Tito_Scwrl_1OY5.pdb
: