Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS
1K25 Chain:A ((632-692))
------------TESSYAMPSIKDISPGELAEALRRNI--VQPIVVGTGTKIKET------SVEEGTNLAPNQQVLLLSDK
General information:
TITO was launched using:
RESULT:
Template:
1K25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17979 for 402 contacts (-44.7/contact) +
2D Compatibility (PS) -6797 + (NN) -4740 + (LL) 1616
1D Compatibility (HY) -800 + (ID) 750
Total energy: -29450.0 ( -73.26 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_1K25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K25-query.scw
PDB file :
Tito_Scwrl_1K25.pdb
: