Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELKVAEAKYFFYLREAKQRNLKISRWK
4FTB Chain:D ((1-21))
------------------------ASMWERVKSIIKSSLAAASNI-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5410 for 77 contacts (70.3/contact) +
2D Compatibility (PS) -2227 + (NN) -735 + (LL) 5444
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 5642.0 ( 73.27 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4FTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTB-query.scw
PDB file :
Tito_Scwrl_4FTB.pdb
: