Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYG-NSRTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT
2QUP Chain:A ((24-145))
------------------------GVSFSEVMGKQRDEKAYERLQALMSKIDDQGKLLSETRTIEELRKYKELVKEFVGDAVELGLRLEER---N-RRGRTKIYKIVKEVDRKLLDLTDAVLAKEKKGLDILNMVGEIKGLLINIYA
General information:
TITO was launched using:
RESULT:
Template:
2QUP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40793 for 767 contacts (-53.2/contact) +
2D Compatibility (PS) -12819 + (NN) -6484 + (LL) 2072
1D Compatibility (HY) -13200 + (ID) 2300
Total energy: -73524.0 ( -95.86 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2QUP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUP-query.scw
PDB file :
Tito_Scwrl_2QUP.pdb
: