Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK
5DOL Chain:A ((2-57))
-DKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQ--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5DOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2247 for 218 contacts (10.3/contact) +
2D Compatibility (PS) -6172 + (NN) -4303 + (LL) 4152
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -13676.0 ( -62.73 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_5DOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DOL-query.scw
PDB file :
Tito_Scwrl_5DOL.pdb
: