Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDA--DTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
2FCJ Chain:A ((3-108))
-RVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGT-ISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDR--AY------REVAAAPIWHLAQVLLRARFDV------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50211 for 760 contacts (-66.1/contact) +
2D Compatibility (PS) -11251 + (NN) -3337 + (LL) 5340
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -68309.0 ( -89.88 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCJ-query.scw
PDB file :
Tito_Scwrl_2FCJ.pdb
: