Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGMIEAIEEKSFQKMCS----RLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 2VF3 Chain:B ((9-246)) | ------SPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREGV---LRVET-NIGIPQEE-NLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYA-------EEKIQRIISGEVEEIENVLGDIARELYPEINEVYRFVEYLGFKP-FVSGSGSTVY------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98051 for 1942 contacts (-50.5/contact) +
2D Compatibility (PS) -25558 + (NN) -11035 + (LL) 4808
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -152986.0 ( -78.78 by residue)
QMean score : 0.401
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