Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEGKNAVITLEVS-GEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAIGVKNGGVLQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIAD--LPAGGDYSFNHESDEVVASILPPQQQEAAEVDEEESADAQPEGENEQ
1FEU Chain:D ((18-181))
-------------------LRRAGKLPGLMYNRHL-NRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPE--ETIAAVVPPEDVE--------------------
General information:
TITO was launched using:
RESULT:
Template:
1FEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75035 for 1098 contacts (-68.3/contact) +
2D Compatibility (PS) -17366 + (NN) -5258 + (LL) 2540
1D Compatibility (HY) -12800 + (ID) 2800
Total energy: -110719.0 ( -100.84 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1FEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FEU-query.scw
PDB file :
Tito_Scwrl_1FEU.pdb
: