Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAEIWGRRIRAFRKLKGYTQEGFAKALGISVSILGEIERGNRL-PSAAIIQDAADVLNISADELAPPEK
3ZKC Chain:B ((3-61))
------GQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTL-----
General information:
TITO was launched using:
RESULT:
Template:
3ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30857 for 388 contacts (-79.5/contact) +
2D Compatibility (PS) -6561 + (NN) -2841 + (LL) 952
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -44357.0 ( -114.32 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZKC-query.scw
PDB file :
Tito_Scwrl_3ZKC.pdb
: