Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAE---MVSDKAI-----------LYNNART-MGMLYIDEREKPLSLQIFGGKKETLVE-AAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAV--NKPVTVKMRMGWDE-DHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTA-NWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG |
| 4BFA Chain:B ((25-264)) | -----------RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTL--------VRVQLLGQFPQWLAENAARAVELGSWG--VDLNC----------GGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEI--ADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNE----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161777 for 1788 contacts (-90.5/contact) +
2D Compatibility (PS) -22584 + (NN) -5163 + (LL) 9332
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -200392.0 ( -112.08 by residue)
QMean score : 0.579
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