Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
1VK6 Chain:A ((105-120))------------------------------RSHKYCGYCGHEMYPS---


General information:
TITO was launched using:
RESULT:

Template: 1VK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -781 for 50 contacts (-15.6/contact) +
2D Compatibility (PS) -1589 + (NN) 752 + (LL) 2424
1D Compatibility (HY) -400 + (ID) 200
Total energy: 206.0 ( 4.12 by residue)
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_1VK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VK6-query.scw
PDB file : Tito_Scwrl_1VK6.pdb: