Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVRGMDIVIVTTANTDEEARELLTQVGMPFQK
1MJI Chain:B ((7-182))---LKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK


General information:
TITO was launched using:
RESULT:

Template: 1MJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72596 for 1288 contacts (-56.4/contact) +
2D Compatibility (PS) -18640 + (NN) -6257 + (LL) 228
1D Compatibility (HY) -21200 + (ID) 5300
Total energy: -123765.0 ( -96.09 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_1MJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MJI-query.scw
PDB file : Tito_Scwrl_1MJI.pdb: