Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG--------------------------------------------------------- |
| 5CM2 Chain:Z ((4-198)) | TRYKPWPIVEKFLRDQKDHSVGVDIGCGNGKYMGVNNKVFIVGSDRSDELVKLAHDMDPSREVVVCDAIDNAHPEGRFDFAISIAVIHHFSTPERRREAVRAILN---TLRPDGRALIYVWALEQDQDVMVPWVKKVDGVEEVRYRYYHLYREGEITSDVEASGGKVLETGYEKDNWWVVAKRGDDW |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8989 for 114 contacts (-78.9/contact) +
2D Compatibility (PS) -3374 + (NN) 1033 + (LL) 184
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -13046.0 ( -114.44 by residue)
QMean score : 0.659
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