Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGLTLAVVIPTGITSLIWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELKPMLQKA |
3A1Y Chain:G ((1-284)) | MAHVAEWKKKEVEELAKLIKSYP-----VIALVDVSSMPAYPLSQMRRLIRE--------------------NGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVT-------------------------NMNPFKLYKFLQQ------------NRQPQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVAIEAGY--------------------ITKETIQDIIGRAFRAMLLLAQQLP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131814 for 1351 contacts (-97.6/contact) +
2D Compatibility (PS) -22009 + (NN) -3745 + (LL) 9436
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -154232.0 ( -114.16 by residue)
QMean score : 0.115
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