Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYM-LLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPN----IR--TNTLQGEVHDEKAFY-SMDGVSGHAGLFSNADDMAILLQVMLNK--GSYRNISLFDQKTADLFTAPSA--------TDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 3ZYT Chain:A ((7-368)) | ---------------------------------------------APGFEPVAELFGVFLEQDPDYSAQVAAYHRGVKVLDLSG--------------GPHIRPDSVTGVFSCSKGMA-GLVMALLVQDGELDLEAEVVKYWPEFGVE------GKSSITVAQLLSHRAGLLGVEGGLTLH-----EVNNSELAAAKLAELPPLWKPGTAFGYHALTIGIFMEELCRRITGSTLQEVFEQRIRAVTGAN-FYLGLPESE--ESRFAQFRWAAD---PSWPWVDPASHFGLAANAAVGDILDLPNIREVRAAGLSSAAGVASAEGMARIYAAALTGLEGKSAMPPLLTEETIRTVSAEQVFGIDRVFGETGCFGTVFMKSHTRM------PFGSYRAFGHDGASASLGFADPVYELGFGYVPQTAEPGGVGC--------------R-NFQLSSAVREVIA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138951 for 3126 contacts (-44.5/contact) +
2D Compatibility (PS) -36205 + (NN) -11334 + (LL) 6088
1D Compatibility (HY) -10800 + (ID) 3100
Total energy: -194302.0 ( -62.16 by residue)
QMean score : 0.491
|
|
|