Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEPLNLHRLTTESRNSQTVEIHKANTLGILKMINNEDMKVAAAVQEVLPDIKTAVDCAYESFQNGGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPEAFLQAAEGIEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAISKDADHSIEVVVGPEAITGSTRMKAATAHKMILNMISTAVMVKIGKVYENLMVDVNVSNKKLKERAISIIQSLTNASYDTARYTLEQADHHVKTAIVMLKTSTDQKQAQTLLDEANGFIDKAIEHYHP |
4S12 Chain:C ((11-298)) | -----------SESRNPDTMDLDTLSTLEMLTRINDEDRKVPEAIRLVIPNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDDVSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEALVAISPVVGPEALTGSTRMKSGTAQKLVLNMLSTGAMVKLGKVYQNLMVDVKATNVKLVDRACRIVVEATGASRVEAENALSQTEFEVKPAILMILKGVSVEQARLNLQQHNGYLRAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168169 for 2446 contacts (-68.8/contact) +
2D Compatibility (PS) -31019 + (NN) -14783 + (LL) 932
1D Compatibility (HY) -24800 + (ID) 7450
Total energy: -245289.0 ( -100.28 by residue)
QMean score : 0.594
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