Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQ-LTNACNLSCSFCYASSGKPY---PEELSSEQWILVMQKLAA--HGVADITLTGGEAKLIK-GF-KELVVVASSL-----FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMDNTHDQLRG---RKGGFKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFRAG-KTLSVGRATEGFK-ALD-IDFEEMVQIQLREAR-HKW--GDRLNIIDWEH-E--ESSFTTDFCTPG---YLAWYIRADGYVTPCQL-ED--LPLGHILEDSMADIGSPARL------------LQLKCEAK--NC-KCIGKIEL---SE-PDLPFQKEVKAGIQE |
| 4K36 Chain:A ((4-362)) | ----------------------------------------------------------------------------------------------------------LSLLIKPASSGCNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLK-NLFDFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89259 for 2307 contacts (-38.7/contact) +
2D Compatibility (PS) -32391 + (NN) -15560 + (LL) 8480
1D Compatibility (HY) -13200 + (ID) 2500
Total energy: -144430.0 ( -62.61 by residue)
QMean score : 0.468
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