Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGS-GKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGF----HRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR |
3OM8 Chain:A ((6-266)) | -------------------------------------------LSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTL--HMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVR-RAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDE-------RIAAVLQAEDMSETAAGFLGNWFPP---ALLER-AEPVVERFRAMLMA-TNRHGLAGSFA-AVRDTDLRAQLAR-IERPTLVIAGAYDTVT-----AASH-G-ELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFLGA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41594 for 2266 contacts (-18.4/contact) +
2D Compatibility (PS) -27356 + (NN) -10905 + (LL) 6648
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -77407.0 ( -34.16 by residue)
QMean score : 0.430
|
|
|