Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAM-PIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRI-PVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 1NQJ Chain:A ((19-117)) | --------------------------------------KATVIPNFN--TT-MQGSLLGDDSRDYYSFEVKEEGEVNIELDKKDE-FGVTWTLHPES--DRITYGQVDG----NK--VSNKV-K-LRPGKYYLLVYKYS--GSGNYELRV----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36187 for 714 contacts (-50.7/contact) +
2D Compatibility (PS) -9923 + (NN) -3150 + (LL) 10952
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -41258.0 ( -57.78 by residue)
QMean score : 0.366
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