Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MFLFTNGKVLWGAVIAAFILSIVFYPFLPTQMPIHYDVANSPDLTVNKLAGTVMLPVLMVVFAWARKIN--WQFVFAVYILLICHI------VVLCLAL-
4HAR Chain:A ((25-122))EACVTSWLWSEGE---GAV---FYRVDLHFTNLGTP-PLDEDGRWDPALMYNPCGPEPPAHVVRAYNQPAGDVRGVWGKGERTYAEQDFRVGGTRWHRLLRMPVR


General information:
TITO was launched using:
RESULT:

Template: 4HAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 185 -40754 -220.29 -485.16
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -220.29
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.088

(partial model without unconserved sides chains):
PDB file : Tito_4HAR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HAR-query.scw
PDB file : Tito_Scwrl_4HAR.pdb: